Your browser doesn't support javascript.
loading
Show: 20 | 50 | 100
Results 1 - 20 de 24
Filter
1.
Rev. Hosp. Ital. B. Aires (2004) ; 36(3): 124-128, sept. 2016. graf, ilus
Article in Spanish | LILACS | ID: biblio-1147033

ABSTRACT

La Biología sintética llegó para quedarse y expandir los límites de la ciencia. Numerosas técnicas moleculares que están siendo empleadas hoy en muchos laboratorios superaron la ficción para convertirse en una realidad. En este artículo se presentan dos técnicas innovadoras de la Biología sintética, como son la técnica de CRISPR, en especial la aplicación de CRISPR-on en la activación de genes específicos humanos, y el uso de ARN mensajeros sintéticos para la purificación y aislamiento celular. Con una mirada enfocada en la medicina traslacional, las herramientas de la Biología sintética ofrecen un gran potencial terapéutico. (AU)


Synthetic biology came to settle in and break the boundaries of the science. Many molecular techniques overcome the fiction to become reality. This article discusses two innovative techniques, as CRISPR, in particular the application of CRISPR-on which is able to activated particular human genes, and the synthetic RNAs messengers for isolation and purification specific cells. From a gaze focused on translational medicine, both tools offer great therapeutic potential. (AU)


Subject(s)
Humans , RNA, Messenger/isolation & purification , Synthetic Biology/classification , Clustered Regularly Interspaced Short Palindromic Repeats , Regenerative Medicine/methods , Synthetic Biology/methods , Cell- and Tissue-Based Therapy/methods
2.
Yonsei Medical Journal ; : 260-264, 2016.
Article in English | WPRIM | ID: wpr-220773

ABSTRACT

The epithelial cytokine response, associated with reactive oxygen species (ROS), is important in Helicobacter pylori (H. pylori)-induced inflammation. H. pylori induces the production of ROS, which may be involved in the activation of mitogen-activated protein kinases (MAPK), janus kinase/signal transducers and activators of transcription (Jak/Stat), and oxidant-sensitive transcription factor, nuclear factor kappa-light-chain-enhancer of activated B cells (NF-kappaB), and thus, expression of interleukin-8 (IL-8) in gastric epithelial cells. alpha-lipoic acid, a naturally occurring thiol compound, is a potential antioxidant. It shows beneficial effects in treatment of oxidant-associated diseases including diabetes. The present study is purposed to investigate whether alpha-lipoic acid inhibits expression of inflammatory cytokine IL-8 by suppressing activation of MAPK, Jak/Stat, and NF-kappaB in H. pylori-infected gastric epithelial cells. Gastric epithelial AGS cells were pretreated with or without alpha-lipoic acid for 2 h and infected with H. pylori in a Korean isolate (HP99) at a ratio of 300:1. IL-8 mRNA expression was analyzed by RT-PCR analysis. IL-8 levels in the medium were determined by enzyme-linked immunosorbent assay. NF-kappaB-DNA binding activity was determined by electrophoretic mobility shift assay. Phospho-specific and total forms of MAPK and Jak/Stat were assessed by Western blot analysis. ROS levels were determined using dichlorofluorescein fluorescence. As a result, H. pylori induced increases in ROS levels, mRNA, and protein levels of IL-8, as well as the activation of MAPK [extracellular signal-regulated kinase 1/2 (ERK1/2), c-Jun NH2-terminal kinase 1/2 (JNK1/2), p38], Jak/Stat (Jak1/2, Stat3), and NF-kappaB in AGS cells, which was inhibited by alpha-lipoic acid. In conclusion, alpha-lipoic acid may be beneficial for prevention and/or treatment of H. pylori infection-associated gastric inflammation.


Subject(s)
Humans , Enzyme-Linked Immunosorbent Assay , Epithelial Cells/metabolism , Gastric Mucosa/drug effects , Gene Expression Regulation, Bacterial , Helicobacter Infections/immunology , Helicobacter pylori/drug effects , Interleukin-8/genetics , JNK Mitogen-Activated Protein Kinases , Janus Kinase 1 , Mitogen-Activated Protein Kinases/biosynthesis , NF-kappa B/metabolism , RNA, Messenger/isolation & purification , Reactive Oxygen Species/metabolism , STAT3 Transcription Factor , Stomach/metabolism , Thioctic Acid/pharmacology
3.
Braz. j. med. biol. res ; 48(4): 339-343, 4/2015. graf
Article in English | LILACS | ID: lil-744358

ABSTRACT

In the canine species, the precise mechanisms of pregnancy maintenance and the initiation of parturition are not completely understood. The expression of genes encoding the receptors for estrogen (ERα mRNA) and oxytocin (OTR mRNA) was studied in the endometrium and myometrium during pregnancy and parturition in dogs. Real-time PCR was performed to quantify the levels of ERα mRNA and OTR mRNA in the uterus of bitches during early (up to 20 days of gestation), mid (20 to 40 days) and late pregnancy (41 to 60 days), and parturition (first stage of labor). All tissues expressed ERα and OTR mRNA, and are thus possibly able to respond to eventual estrogen and oxytocin hormonal stimuli. No statistically significant differences in the expression of ERα mRNA were verified in the endometrium and myometrium throughout pregnancy and parturition, but expression of OTR mRNA increased at both parturition and late pregnancy. We concluded that the increase of endometrial and myometrial OTR mRNA expression in dogs is not an event dependent on estrogenic stimulation. Moreover, the contractility response of the canine uterus to oxytocin begins during pregnancy and maintains myometrial activity. The expression of OTR mRNA in canine uterine tissues varied over time, which supports an interpretation that the sensitivity and response to hormone therapy varies during the course of pregnancy and labor. Further studies are needed to elucidate the factors underlying the synthesis of uterine oxytocin receptors and the possible role of ERβ rather than ERα in the uterine tissues during pregnancy and parturition in dogs.


Subject(s)
Animals , Dogs , Female , Pregnancy , Gene Expression , Parturition/genetics , Receptors, Estrogen/genetics , Receptors, Oxytocin/genetics , Uterus/physiology , Endometrium/metabolism , Myometrium/metabolism , Parturition/physiology , RNA, Messenger/isolation & purification , RNA, Messenger/metabolism , Real-Time Polymerase Chain Reaction/veterinary , Receptors, Estrogen/physiology , Receptors, Oxytocin/physiology
4.
Braz. j. med. biol. res ; 47(12): 1075-1084, 12/2014. tab, graf
Article in English | LILACS | ID: lil-727668

ABSTRACT

In this study, we investigated the potential role of high-mobility group box 1 (HMGB1) in severe acute pancreatitis (SAP) and the effects of growth hormone (G) and somatostatin (S) in SAP rats. The rats were randomly divided into 6 groups of 20 each: sham-operated, SAP, SAP+saline, SAP+G, SAP+S and SAP+G+S. Ileum and pancreas tissues of rats in each group were evaluated histologically. HMGB1 mRNA expression was measured by reverse transcription-PCR. Levels of circulating TNF-α, IL-1, IL-6, and endotoxin were also measured. In the SAP group, interstitial congestion and edema, inflammatory cell infiltration, and interstitial hemorrhage occurred in ileum and pancreas tissues. The levels of HMGB1, TNF-α, IL-1, IL-6 and endotoxin were significantly up-regulated in the SAP group compared with those in the sham-operated group, and the 7-day survival rate was 0%. In the SAP+G and SAP+S groups, the inflammatory response of the morphological structures was alleviated, the levels of HMGB1, TNF-α, IL-1, IL-6, and endotoxin were significantly decreased compared with those in the SAP group, and the survival rate was increased. Moreover, in the SAP+G+S group, all histological scores were significantly improved and the survival rate was significantly higher compared with the SAP group. In conclusion, HMGB1 might participate in pancreas and ileum injury in SAP. Growth hormone and somatostatin might play a therapeutic role in the inflammatory response of SAP.


Subject(s)
Animals , Male , Growth Hormone/metabolism , HMGB1 Protein/metabolism , Pancreas/pathology , Pancreatitis, Acute Necrotizing/etiology , Somatostatin/metabolism , Edema/pathology , Endotoxins/blood , Gene Expression , HMGB1 Protein/genetics , Hematoma/pathology , Ileum/injuries , Ileum/pathology , Interleukin-1beta/blood , /blood , Microscopy, Electron, Transmission , Neutrophil Infiltration/physiology , Pancreas/injuries , Pancreas/metabolism , Pancreatitis, Acute Necrotizing/metabolism , Pancreatitis, Acute Necrotizing/pathology , Random Allocation , Rats, Sprague-Dawley , Reverse Transcriptase Polymerase Chain Reaction , RNA, Messenger/isolation & purification , Survival Rate , Tumor Necrosis Factor-alpha/blood
5.
Arq. bras. endocrinol. metab ; 58(6): 630-639, 08/2014. tab, graf
Article in English | LILACS | ID: lil-721394

ABSTRACT

Objective: We sought to test the effect of different dosages of pioglitazone (PIO) on the glomerular expression of podocalyxin and urinary sediment podocalyxin excretion and to explore the potential renoprotective mechanism. Materials and methods: Type 1 diabetes induced with streptozotocin (65 mg/kg) in 36 male Sprague-Dawley rats were randomly allocated to be treated with vehicle or 10, 20, 30 mg/kg/d PIO respectively for 8 weeks. Eight rats were enrolled in the normal control group. Results: At 8th week, rats were sacrificed for the observation of kidney injury through electron microscope. Glomerular podocalyxin production including mRNA and protein were determined by RT-PCR and immunohistochemistry respectively. Levels of urinary albumin excretion and urinary sediment podocalyxin, kidney injury index were all significantly increased, whereas expression of glomerular podocalyxin protein and mRNA were decreased significantly in diabetic rats compared to normal control. Dosages-dependent analysis revealed that protective effect of PIO ameliorated the physiopathological changes and reached a peak at dosage of 20 mg/kg/d. Conclusion: PIO could alleviate diabetic kidney injury in a dose-dependent pattern and the role may be associated with restraining urinary sediment podocalyxin excretion and preserving the glomerular podocalyxin expression. .


Objetivo: Buscamos testar os efeitos de diferentes doses de pioglitazona (PIO) sobre a expressão glomerular de podocalixina e sobre a excreção de podocalixina em células do sedimento urinário, além de explorar o potencial mecanismo de proteção renal. Materiais e métodos: O diabetes tipo 1 foi induzido em 36 ratos Sprague-Dawley machos com estreptozotocina (65 mg/kg). Os animais foram tratados apenas com o veículo, ou com 10, 20, 30 mg/kg/d de PIO por 8 semanas. Oito ratos foram colocados no grupo controle. Resultados: Na oitava semana, os ratos foram sacrificados para se observar a lesão renal em microscopia eletrônica. A produção de podocalixina glomerular, incluindo mRNA e proteína, foi determinada por RT-PCR e imuno-histoquímica, respectivamente. Os níveis urinários de albumina e podocalixina nas células do sedimento urinário e o índice de lesão renal estavam todos significativamente aumentados, enquanto a expressão glomerular da proteína podocalixina e do mRNA estava significativamente diminuída em ratos diabéticos comparados com o controle normal. A análise dos efeitos dose-dependentes revelou que o efeito protetor da PIO melhorou as mudanças fisiopatológicas e atingiu um pico na dose de 20 mg/kg/dia. Conclusão: A PIO pode melhorar a injúria renal de forma dose-dependente e este papel pode estar associado com a prevenção da excreção de podocalixina nas células do sedimento urinário e com a preservação da expressão glomerular de podocalixina. .


Subject(s)
Animals , Male , Diabetes Mellitus, Experimental/drug therapy , Hypoglycemic Agents/therapeutic use , Podocytes/pathology , Sialoglycoproteins/metabolism , Thiazolidinediones/therapeutic use , Cholesterol, HDL/blood , Cholesterol, HDL/drug effects , Cholesterol, LDL/blood , Cholesterol, LDL/drug effects , Diabetes Mellitus, Experimental/pathology , Immunohistochemistry , Kidney Glomerulus/drug effects , Kidney Glomerulus/injuries , Kidney Glomerulus/ultrastructure , Microscopy, Electron , Random Allocation , Rats, Sprague-Dawley , Real-Time Polymerase Chain Reaction , RNA, Messenger/isolation & purification , Sialoglycoproteins/genetics , Sialoglycoproteins/urine , Triglycerides/blood
6.
Biol. Res ; 47: 1-7, 2014. graf, tab
Article in English | LILACS | ID: biblio-950756

ABSTRACT

BACKGROUND: During fish oocyte maturation, specific molecules are expressed and accumulated within oocyte until fertilization and embryo development. Special attention have been paid in members of the transforming growth factor (TGF-ß) superfamily; growth differentiation factor 9 (GDF9/gdf9) and bone morphogenetic protein 15 (BMP15/bmp15), which exert regulatory functions during oocyte maturation and follicle development. However, little attention has been paid to the involvement of these molecules during embryogenesis considering its importance for the formation of a good quality egg and subsequent embryo survival. The purpose of this study was to analyze the expression of gdf9 andbmp15 in previtellogenic oocytes and during early embryonic development in Seriola lalandi, a pelagic fish with increasing prospect for its aquaculture development, which however, show high mortality at embryo and larval stages. RESULTS: Through RT-qPCR it was found that gdf9 expression was higher in previtellogenic oocytes decreasing after ovulation. This expression profile agrees with its participation in early stages of the follicular development. The transcripts for bmp15 also showed the highest levels in previtellogenic oocytes, however this expression was lower than obtained with gdf9. Conversely, in recently spawned oocytes mRNA bmp15 levels were highest than observed to gdf9. This, is consequent with the main role proposed for this growth factor at the final fish oocyte maturation: avoid the ovulation of an immature oocyte. During embryo development, low levels of mRNA were detected to gdf9, with an increase in 48 H post-fertilization embryos. The bmp15 expression did not change throughout development and was higher than gdf9 at 16 cells, blastula and appearance embryos stages. CONCLUSIONS: Both (gdf9 and bmp15) expression profiles in previtellogenic oocytes and newly spawned eggs are consistent with the described functions for these growth factors in vertebrate ovarian physiology in early and late stages of the follicular development. So, these genes could be considered as quality biomarkers at these stages. However, further studies of these proteins throughout folliculogenesis, are necessaries to fully understand their functions during the oocyte formation. In addition, the persistent expression of these growth factors during development, allows us to speculate possible roles in embryonic processes, which must also be addressed.


Subject(s)
Animals , Oocytes/metabolism , Vitellogenesis/physiology , Perciformes/embryology , Bone Morphogenetic Protein 15/metabolism , Growth Differentiation Factor 9/metabolism , Transcription, Genetic/physiology , Perciformes/classification , RNA, Messenger/isolation & purification , RNA, Messenger/metabolism , Biomarkers/analysis , DNA, Complementary/analysis , DNA Primers , Embryonic Development/genetics , Real-Time Polymerase Chain Reaction , Fishes/embryology
7.
Electron. j. biotechnol ; 16(6): 4-4, Nov. 2013. ilus, tab
Article in English | LILACS | ID: lil-696545

ABSTRACT

Background: Kalanchoe daigremontiana is an attractive model system for the study of the molecular mechanisms of somatic embryogenesis and organogenesis competence due to its formation of plantlets with adventitious roots on the leaf margins that are derived from somatic embryos. The suppression subtractive hybridization technique was used to investigate gene expression during asexual reproduction. Leaves from plants subjected to drought stress provided the source of ‘Tester’ DNA, and leaves from plants grown under normal conditions provided the ‘Driver’ DNA for subtractive hybridization. Results: A total of 481 high quality ESTs were generated, which clustered into 390 unigenes. Of these unigenes, 132 grouped into 12 functional categories, suggesting that asexual reproduction is a complicated process involving a large number of genes. The expression characteristics of selected genes from the SSH library were determined by real-time PCR and were classified into five groups, suggesting that gene expression patterns during asexual reproduction are complex. Up-regulation of S-adenosylhomocysteine hydrolase suggested that a decrease in cytokinin levels promotes the initiation of plantlet formation. Many other genes, such as inorganic pyrophosphatase and glutamate decarboxylase, play important roles in gene regulation during asexual reproduction. Conclusion: Our results provide a framework and unified platform on which future research on asexual reproduction in K. daigremontiana can be based. This represents the first genome-wide study of asexual reproduction in K. daigremontiana.


Subject(s)
Stress, Physiological , Plant Leaves/genetics , Kalanchoe/genetics , Droughts , RNA, Messenger/isolation & purification , Gene Expression , Sequence Analysis , DNA, Complementary , Computational Biology , Real-Time Polymerase Chain Reaction , Nucleic Acid Hybridization
8.
Mem. Inst. Oswaldo Cruz ; 108(6): 755-762, set. 2013. tab, graf
Article in English | LILACS | ID: lil-685485

ABSTRACT

Currently, several assays can confirm acute dengue infection at the point-of-care. However, none of these assays can predict the severity of the disease symptoms. A prognosis test that predicts the likelihood of a dengue patient to develop a severe form of the disease could permit more efficient patient triage and treatment. We hypothesise that mRNA expression of apoptosis and innate immune response-related genes will be differentially regulated during the early stages of dengue and might predict the clinical outcome. Aiming to identify biomarkers for dengue prognosis, we extracted mRNA from the peripheral blood mononuclear cells of mild and severe dengue patients during the febrile stage of the disease to measure the expression levels of selected genes by quantitative polymerase chain reaction. The selected candidate biomarkers were previously identified by our group as differentially expressed in microarray studies. We verified that the mRNA coding for CFD, MAGED1, PSMB9, PRDX4 and FCGR3B were differentially expressed between patients who developed clinical symptoms associated with the mild type of dengue and patients who showed clinical symptoms associated with severe dengue. We suggest that this gene expression panel could putatively serve as biomarkers for the clinical prognosis of dengue haemorrhagic fever.


Subject(s)
Humans , Antigens, Neoplasm/genetics , Cysteine Endopeptidases/genetics , Membrane Glycoproteins/genetics , Neoplasm Proteins/genetics , Peroxiredoxins/genetics , Receptors, IgG/genetics , Receptors, Interleukin-1/genetics , Severity of Illness Index , Severe Dengue/diagnosis , Apoptosis Regulatory Proteins/genetics , Biomarkers , Gene Expression , GPI-Linked Proteins/genetics , Immunity, Innate/genetics , Leukocytes, Mononuclear/immunology , Leukocytes, Mononuclear/pathology , Microarray Analysis , Prognosis , Real-Time Polymerase Chain Reaction , RNA, Messenger/isolation & purification , Serotyping
9.
Braz. j. med. biol. res ; 46(6): 546-554, 02/jul. 2013. tab, graf
Article in English | LILACS | ID: lil-679208

ABSTRACT

Multidrug resistance (MDR) poses a serious impediment to the success of chemotherapy for laryngeal cancer. To identify microRNAs and mRNAs associated with MDR of human laryngeal cancer Hep-2 cells, we developed a multidrug-resistant human laryngeal cancer subline, designated Hep-2/v, by exposing Hep-2 cells to stepwise increasing concentrations of vincristine (0.02-0.96'µM). Microarray assays were performed to compare the microRNA and mRNA expression profiles of Hep-2 and Hep-2/v cells. Compared to Hep-2 cells, Hep-2/v cells were more resistant to chemotherapy drugs (∼45-fold more resistant to vincristine, 5.1-fold more resistant to cisplatin, and 5.6-fold more resistant to 5-fluorouracil) and had a longer doubling time (42.33±1.76 vs 28.75±1.12'h, P<0.05), higher percentage of cells in G0/G1 phase (80.98±0.52 vs 69.14±0.89, P<0.05), increased efflux of rhodamine 123 (95.97±0.56 vs 12.40±0.44%, P<0.01), and up-regulated MDR1 expression. A total of 7 microRNAs and 605 mRNAs were differentially expressed between the two cell types. Of the differentially expressed mRNAs identified, regulator of G-protein signaling 10, high-temperature requirement protein A1, and nuclear protein 1 were found to be the putative targets of the differentially expressed microRNAs identified. These findings may open a new avenue for clarifying the mechanisms responsible for MDR in laryngeal cancer.


Subject(s)
Humans , Drug Resistance, Neoplasm/genetics , Laryngeal Neoplasms/genetics , MicroRNAs/isolation & purification , ATP Binding Cassette Transporter, Subfamily B, Member 1/genetics , RNA, Messenger/isolation & purification , Antineoplastic Agents/pharmacology , Basic Helix-Loop-Helix Transcription Factors/genetics , Cell Line, Tumor , Cell Proliferation/drug effects , Cisplatin/pharmacology , Flow Cytometry , Fluorouracil/pharmacology , G1 Phase Cell Cycle Checkpoints , Genes, MDR , Laryngeal Neoplasms/drug therapy , Neoplasm Proteins/genetics , Real-Time Polymerase Chain Reaction , Reverse Transcriptase Polymerase Chain Reaction , RGS Proteins/genetics , /pharmacokinetics , Serine Endopeptidases/genetics , Tissue Array Analysis , Vincristine/pharmacology
10.
Electron. j. biotechnol ; 13(1): 14-15, Jan. 2010. ilus, tab
Article in English | LILACS | ID: lil-559597

ABSTRACT

Here we introduce a new approach for the screening of DNA binding proteins, using a phage library based on a phage display technique. In principal, a complementary DNA (cDNA) library based on the recombinant bacteriophage T7 expressing target proteins on its capsid (phage display) is constructed. These phage particles are hybridized with a biotinylated target DNA fragment which is immobilized on the surface of streptavidin paramagnetic particle (SA-PMP). The phage particles are released from the target DNA fragment by a nuclease treatment and the recovered phages are used to the next round of hybridization. These processes are repeated three times to amplify the target phages in the population. This simple method is faster, and more systemic than other current methods (e.g. yeast one hybrid system). As a proof of this principle, we tried to isolate transcription factors which specifically bind to the promoter region of the Arabidopsis thaliana AtGST11 gene. Two obtained candidates, RING zinc finger protein and AtHB6, showed DNA binding activity to the AtGST11 promoter region. We could validate that our new application of phage display is a superior method for isolation of DNA binding proteins with a broad range of potential applications.


Subject(s)
Animals , Arabidopsis/growth & development , Arabidopsis/metabolism , /enzymology , /metabolism , Transcription Factors , DNA, Complementary/biosynthesis , DNA, Complementary/chemistry , RNA, Messenger/isolation & purification , Clone Cells/cytology , Clone Cells/ultrastructure , Bacterial Growth/methods
11.
Rev. colomb. biotecnol ; 10(2): 104-110, dic. 2008. ilus
Article in Spanish | LILACS | ID: lil-505457

ABSTRACT

RT-PCR es una tecnica en la que usando ARN mensajero como molde, se obtiene complementario o cADN por transcripcion inversa, y luego se amplifica uno de los cADN por PCR, mediante el uso de primers especificos. Esta tecnica permite realizar estudios de expresion, a nivel de ARN mensajero. Con el proposito de implementar la tecnica en papa (Solanum tuberosum spp. Andigena), se utilizaron


Subject(s)
RNA, Messenger/isolation & purification , Solanum tuberosum/genetics
12.
Rev. invest. clín ; 57(3): 434-441, may.-jun. 2005. ilus, tab
Article in Spanish | LILACS | ID: lil-632464

ABSTRACT

High risk human papillomavirus (HPV) infection is considered to be the most important etiological factor of Cervical Uterine Cancer. In order to determine the global expression pattern and to identify possible molecular markers of cervical cancer, cDNA arrays with probe sets complementary to 8,000 human genes were used to examine the expression profiles among 5 cell lines derived from human cervical cancer, three HPV16(+) tumor samples and three normal cervical tissues HPV(-). The levels of expression of different cellular processes were identified. Hierarchical clustering was performed and the gene expression using RT-PCR was confirmed. Two genes were found to be consistently overexpressed in invasive cervical cancer biopsies; one of them, IL-6 was previously reported to be overexpressed in cervical cancer and one novel gene, MMP10, previously not known to be related to cervical cancer. Hierarchical clustering of the expression data revealed that samples with common HPV type infection grouped together, maybe this could mean that differences between HPV types could be indirectly determined by expression profiles.


La infección por virus de papiloma de alto riesgo (VPH) es considerada como el factor etiológico más importante del cáncer cérvico uterino (CaCU). Con el fin de determinar el patrón de expresión global e identificar algunos posibles genes marcadores del CaCU, se utilizaron microhileras de DNA que contenían 8,000 secuencias que codificaban para transcritos diferentes, para estudiar los perfiles de expresión de cinco líneas celulares derivadas de CaCU, tres muestras tumorales conteniendo VPH 16 y tres muestras normales negativas para la presencia de VPH. Se identificaron los niveles de expresión de genes relacionados con diferentes rutas metabólicas. Se llevó a cabo el análisis de agrupamiento jerárquico y posteriormente se confirmó la sobrexpresión de dos genes mediante RT-PCR. Estos dos genes se encontraron sobrexpresados en biopsias tumorales cervicales. Uno de ellos, el gen de IL6, que ha sido previamente reportado en relación con CaCU, así como el gen de la matriz-metaloproteasa 10 (MMP10) por primera vez relacionado con esta neoplasia. El análisis de agrupamiento jerárquico, además, reveló que las muestras que contienen el mismo tipo viral están asociadas, sugiriendo posibles diferencias en expresión entre tipos virales.


Subject(s)
Adult , Female , Humans , Carcinoma, Squamous Cell/genetics , Gene Expression Profiling , Gene Expression Regulation, Neoplastic , Neoplasm Proteins/genetics , Papillomaviridae/isolation & purification , Papillomavirus Infections/genetics , Biomarkers, Tumor/genetics , Uterine Cervical Neoplasms/genetics , Biopsy , Colposcopy , Carcinoma, Squamous Cell/metabolism , Carcinoma, Squamous Cell/pathology , Carcinoma, Squamous Cell/virology , Cell Line, Tumor/metabolism , Cell Line, Tumor/virology , Cervix Uteri/pathology , DNA, Complementary/genetics , DNA, Neoplasm/genetics , DNA, Neoplasm/isolation & purification , /biosynthesis , /genetics , Metalloendopeptidases/biosynthesis , Metalloendopeptidases/genetics , Neoplasm Proteins/biosynthesis , Premenopause , Papillomavirus Infections/metabolism , Papillomavirus Infections/pathology , Papillomavirus Infections/virology , Reverse Transcriptase Polymerase Chain Reaction , RNA, Messenger/genetics , RNA, Messenger/isolation & purification , RNA, Neoplasm/genetics , RNA, Neoplasm/isolation & purification , Biomarkers, Tumor/biosynthesis , Uterine Cervical Neoplasms/metabolism , Uterine Cervical Neoplasms/pathology , Uterine Cervical Neoplasms/virology
13.
Indian J Exp Biol ; 2005 Feb; 43(2): 197-201
Article in English | IMSEAR | ID: sea-56941

ABSTRACT

In the present protocol for extraction of RNA, hexadecyltrimethylammoniumbromide (CTAB) and insoluble polyvinylpyrrolidone were used followed by LiCl precipitation, CsCl ultracentrifugation and finally poly (A)+ mRNA was isolated with the help of oligo(dT)-cellulose columns. The isolated poly (A)+ mRNA was found to be suitable for cDNA-AFLP and suppression subtractive hybridization applications. It is a modified and consolidated protocol based on previously described methods for isolated steps and works better for medicinal and aromatic plants. High yield of poly (A)+ mRNA coupled with its amenability for downstream reactions like RT-PCR, northern blotting and cDNA synthesis for library construction is a key feature of the present protocol.


Subject(s)
Catharanthus/chemistry , Plant Extracts/chemistry , Plants, Medicinal/chemistry , RNA, Messenger/isolation & purification , RNA, Plant/isolation & purification , Reference Standards
14.
Biol. Res ; 38(2/3): 267-271, 2005. tab, graf
Article in English | LILACS | ID: lil-424730

ABSTRACT

Matrix metalloproteinases (MMPs) comprise a large group of endoproteinases that degrade all protein components of the extracellular matrix. Functionally, MMPs contribute to several different physiological as well as pathological conditions. The number of newly described MMPs has increased in recent years, although current knowledge about their expression pattern in various tissues remains incomplete. Here we analyzed the relative mRNA expression of the most recently described MMPs _ MT5-MMP (MMP-24), MT6-MMP (MMP-25), MMP-27 and epilysin (MMP-28) _ in a broad selection of rat tissues using real time-PCR. MMP-24 mRNA was found to be widely expressed with predominance in the central nervous system. MMP-25 mRNA, in contrast, exhibited peak expression levels in testis, kidney and skeletal muscle, differing from previously described distribution patterns in humans. mRNAs for MMP-27 and MMP-28 were generally expressed at a lower level. All four MMPs studied were detected at higher mRNA levels in bone and kidney, suggesting a possible role of these MMPs in physiological processes within these two organs. The present study highlights the differential distribution pattern of newly described MMPs among different tissues and underlines differences in the mRNA expression between different species.


Subject(s)
Adult , Animals , Infant, Newborn , Rats , Matrix Metalloproteinases/analysis , Matrix Metalloproteinases/biosynthesis , Matrix Metalloproteinases/genetics , Matrix Metalloproteinases/metabolism , Matrix Metalloproteinases/chemistry , RNA, Messenger/isolation & purification , RNA, Messenger/analysis , RNA, Messenger/chemistry , Kidney/chemistry , Testis/chemistry
15.
Biol. Res ; 34(1): 1-6, 2001. ilus
Article in English | LILACS | ID: lil-288327

ABSTRACT

Recent gene knock-out studies in mice have suggested that ventricular myosin light chain-2 (vMLC2) has a role in the regulation of cardiogenic development and that perturbation in expression of vMLC2 is linked to the onset of dilated cardiomyopathy. In an attempt to develop an avian model for such studies, we examined the expression pattern of vMLC2 in chicken embryos at various stages and analyzed the effect of antisense oligonucleotide-mediated interference of vMLC2 function in cultures of whole embryos. Our results showed vMLC2 to be a specific marker for ventricular chamber throughout chicken embryonic development and antisense vMLC2 treatment of primitive streak stage (stage 4) embryos to produce pronounced dilation of heart tube with severe deficiency in formation of striated myofibrils. Further studies with antisense mRNA techniques of whole embryo cultures should, therefore, be useful to evaluate the role of vMLC2 and other putative regulatory factors in cardiac myofibrillogenesis.


Subject(s)
Animals , Chick Embryo , Gene Expression , Heart/embryology , Myosin Light Chains/genetics , Cardiomyopathy, Dilated/etiology , Chick Embryo/ultrastructure , Heart Defects, Congenital/etiology , Heart Ventricles , In Situ Hybridization/methods , Myosin Light Chains/physiology , Oligonucleotides, Antisense/pharmacology , Reverse Transcriptase Polymerase Chain Reaction , RNA, Messenger/isolation & purification
16.
P. R. health sci. j ; 18(3): 257-65, sept. 1999. ilus, tab, graf
Article in English | LILACS | ID: lil-255635

ABSTRACT

Rat gene 33 (g33) mRNA has a widespread tissue distribution. Insulin and various agents such as glucocorticoids, phorbol esters and plant lectins regulate G33 expression in rat hepatoma cells. The regulation of g33 by insulin and a phorbol ester was examined in two Chinese Hamster ovary (CHO) cell lines, CHO-T cells (which overexpress human insulin receptors (hIR)) and wild type CHOwt cells. These cell lines were used to determine how expression of the hIR influences the capacity of g33 to respond to insulin and phorbol myristate acetate (PMA). Treatment of CHOwt and CHO-T cells with insulin increased mRNAg33 levels three to four-fold, with a maximum effect reached after three hours of treatment. PMA treatment of CHOwt and CHO-T cells caused a similar elevation of mRNAg33 levels after three hours. Insulin had no effect on mRNAg33 stability in both CHO cell lines. Additionally, the effects of insulin and PMA on mRNAg33 levels were additive only in CHO-T cells. Insulin or PMA-pretreated CHO-T cells were able to respond to both agents, but elevation ofmRNAg33 levels was maximal. In contrast, when insulin and/or PMA-pretreated CHOwt cells were exposed to insulin or PMA, g33 was able to respond maximally. These results suggest that insulin and phorbol esters act through different signaling mechanisms in CHOwt cells. Additionally, insulin's ability to stimulate g33 expression in CHOwt cells suggests that this insulin effect may be independent of the insulin eceptor. There are differences in the regulation pattern of g33 by insulin and PMA in rat hepatoma and among the two CHO cell lines used in this study


Subject(s)
Humans , Animals , Cricetinae , Rats , CHO Cells , Gene Expression Regulation , Insulin/pharmacology , RNA, Messenger/analysis , Tetradecanoylphorbol Acetate/pharmacology , Antibiotics, Antineoplastic/pharmacology , Blotting, Northern , CHO Cells/metabolism , Dactinomycin/pharmacology , Nucleic Acid Synthesis Inhibitors/pharmacology , Insulin/physiology , Receptor, Insulin/physiology , Gene Expression Regulation , RNA, Messenger/adverse effects , RNA, Messenger/isolation & purification
17.
Braz. j. med. biol. res ; 32(7): 877-84, July 1999.
Article in English | LILACS | ID: lil-234894

ABSTRACT

Differentially expressed genes are usually identified by comparing steady-state mRNA concentrations. Several methods have been used for this purpose, including differential hybridization, cDNA subtraction, differential display and, more recently, DNA chips. Subtractive hybridization has significantly improved after the polymerase chain reaction was incorporated into the original method and many new protocols have been established. Recently, the availability of the well-known coding sequences for some organisms has greatly facilitated gene expression analysis using high-density microarrays. Here, we describe some of these modifications and discuss the benefits and drawbacks of the various methods corresponding to the main advances in this field


Subject(s)
Humans , Gene Expression/genetics , Genes/genetics , Oligonucleotide Array Sequence Analysis/methods , Cloning, Molecular , Hybridization, Genetic/genetics , Polymerase Chain Reaction , RNA, Messenger/genetics , RNA, Messenger/isolation & purification
18.
Rev. chil. cardiol ; 16(2): 67-74, abr.-jun. 1997.
Article in Spanish | LILACS | ID: lil-197895

ABSTRACT

Se ha postulado la existencia de un sistema renina-angiotensina (SRA) intracardíaco funcional que explica las acciones tróficas de la angiotensia II (AII) sobre las distintas poblaciones celulares, así como la acción preventiva y regresiva de distintos fármacos en la hipertrofia ventricular hipertensiva o secundaria al infarto del miocardio. En este estudio hemos determinado la expresión génica de los componentes del SRA en cardiomiocitos ventriculares de corazón de rata adulta, aislados por perfusión retrógrada con proteasas. La expresión de los RNA mensajeros (mRNA) para angiotensinógeno, renina, enzima convertidora (ECA) y receptor subtipo AT-1 para AII (AT-1R), se evaluó a través de la técnica de transcripción reversa asociada a la reacción en cadena de la DNA polimerasa (RT-PCR), usando oligonucleótidos partidores específicos. El procedimiento de aislamiento celular permitió obtener una población enriquecida de cardiomicitos ventriculares viables (> 95 por ciento), los cuales presentaron actividad contráctil espontánea e inmunorreactividad a anticuerpos dirigidos a proteínas específicas del cardiomiocito. En estas células y en tejidos controles (hígado, riñón y pulmón) se detectaron los mRNA para angiotensinógeno, renina, ECA y AT-1R. Se concluye que los cardiomiocitos ventriculares de rata expresan todos los genes esenciales del SRA,confirmando la existencia de este sistema intracardíaco. Igualmente, la implementación de estas metodologías permitirán estudiar in vitro la regulación del SRA local bajo condiciones fisiológicas y patológicas


Subject(s)
Animals , Rats , Gene Expression/physiology , Renin-Angiotensin System/physiology , Polymerase Chain Reaction , Rats, Sprague-Dawley , RNA, Messenger/isolation & purification
20.
Rev. invest. clín ; 48(6): 413-9, nov.-dic. 1996. tab, ilus
Article in English | LILACS | ID: lil-187910

ABSTRACT

Se estudió el efecto de la concentración de la proteína de la dieta sobre concentraciones de ARNm de la tirosina aminotransferasa (TAT) y la fenilalanina hidroxilasa (PAH) hepáticas en ratas adaptadas a consumir dietas con 18 ó 50 por ciento de caseína en un horario restringido de 7 horas (9 a 16 h) durante 5 días. Las concentraciones de ARNm de TAT de ratas adaptadas a una dieta de 18 por ciento de caseína y alimentadas en forma aguda con dietas que contenían 6, 18 ó 50 por ciento de caseína, fueron 0.15, 0.84 y 5.08 veces más altas a las 6 horas en comparación con las concentraciones de ARNm antes de la administración de la dieta. Las concentraciones de ARNm de TAT después de 17 horas de ayuno en las ratas alimentadas con 6, 18 ó 50 por ciento de caseína fueron respectivamente -0.45, 1.76 y 9.11 veces mayores en comparación con el valor basal. Las concentraciones ARNm de PAH mostraron un patrón similar; en las ratas adaptadas a 18 por ciento de caseína se observó un aumento de -.68, 1.63 y 2.5 veces en las concentraciones de ARNm de PAH en las ratas alimentadas en forma aguda con 6, 18 y 50 por ciento de casína respectivmanete y un aumento de -0.86, 2.32 y 9.33 veces después de 17 horas de ayuno. La concentraciones de ARNm de TAT y PAH en ratas adaptadas a consumir 50 por ciento de caseína y luego alimentadas con 6 ó 50 por ciento de caseína mostraron un pico máximo a las 6 horas de ayuno. Estos resultados sugieren que las concentraciones crecientes de proteína en la dieta son capaces de producir aumentos en la concentración de los ARNm de las dos enzimas, posiblemente para eliminar el exceso de aminoácidos consumidos, ya que la concentración de los ARNm dependió más del contenido de proteína de la dieta de adaptación


Subject(s)
Animals , Rats , Caseins/administration & dosage , Caseins/analysis , Caseins/blood , Liver/enzymology , Nucleic Acid Hybridization , Phenylalanine Hydroxylase/blood , Phenylalanine Hydroxylase/drug effects , Phenylalanine Hydroxylase/isolation & purification , Dietary Proteins , Rats, Wistar , RNA, Messenger/blood , RNA, Messenger/drug effects , RNA, Messenger/isolation & purification , RNA/isolation & purification , Transaminases/analysis , Transaminases/blood , Transaminases/isolation & purification , Tyrosine/analysis , Tyrosine/blood , Tyrosine/isolation & purification
SELECTION OF CITATIONS
SEARCH DETAIL